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Reaction: FDH5pp


Descriptive name:

Formate Dehydrogenase (menaquinone-8) (periplasm)

Model:

iECSF_1327

Reaction:

2.0 h_c + mqn8_c + for_p → mql8_c + co2_p + h_p

Metabolites:

Stoichiometry
BiGG ID
Name
-2.0
h_c
H+
1.0
mql8_c
Menaquinol 8
-1.0
mqn8_c
Menaquinone 8
1.0
co2_p
CO2 CO2
-1.0
for_p
Formate
1.0
h_p
H+

Default bounds:

(0.0, 1000.0)

Objective coefficient:

0.0

Subsystem:

Oxidative Phosphorylation

Gene Reaction Rule:

(ECSF_1388 and ECSF_1389 and ECSF_1390) or (ECSF_3749 and ECSF_3750 and ECSF_1388)

Genes:

ECSF_3750
ECSF_1389
ECSF_1388
ECSF_1390
ECSF_3749


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Universal reaction ?

  • FDH5pp

External database links

  • MetaNetX (MNX) Equation: MNXR99480

Provided by MetaNetX (CC BY 4.0)

Old identifiers

    FDH5pp

FDH5pp in other models

  • iAPECO1_1312
  • iB21_1397
  • iBWG_1329
  • ic_1306
  • iE2348C_1286
  • iEC042_1314
  • iEC1344_C
  • iEC1349_Crooks
  • iEC1356_Bl21DE3
  • iEC1364_W
  • iEC1368_DH5a
  • iEC1372_W3110
  • iEC55989_1330
  • iECABU_c1320
  • iECB_1328
  • iECBD_1354
  • iECD_1391
  • iECDH10B_1368
  • iEcDH1_1363
  • iECDH1ME8569_1439
  • iEcE24377_1341
  • iECED1_1282
  • iEcHS_1320
  • iECIAI1_1343
  • iECIAI39_1322
  • iECNA114_1301
  • iECO103_1326
  • iECO111_1330
  • iECO26_1355
  • iECOK1_1307
  • iEcolC_1368
  • iECP_1309
  • iECs_1301
  • iECS88_1305
  • iECSE_1348
  • iECSF_1327
  • iEcSMS35_1347
  • iECSP_1301
  • iECUMN_1333
  • iECW_1372
  • iEKO11_1354
  • iETEC_1333
  • iJO1366
  • iLF82_1304
  • iML1515
  • iNRG857_1313
  • iPC815
  • iS_1188
  • iSBO_1134
  • iSF_1195
  • iSFV_1184
  • iSSON_1240
  • iUMN146_1321
  • iUMNK88_1353
  • iUTI89_1310
  • iWFL_1372
  • iY75_1357
  • iYS1720
  • iZ_1308
  • STM_v1_0

Latest BiGG Models publication:

King ZA, Lu JS, Dräger A, Miller PC, Federowicz S, Lerman JA, Ebrahim A, Palsson BO, and Lewis NE. BiGG Models: A platform for integrating, standardizing, and sharing genome-scale models (2016) Nucleic Acids Research 44(D1):D515-D522. doi:10.1093/nar/gkv1049


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